Respiratory Molecular Testing Kit RPP

RESPIRATORY KIT

Our Respiratory Kit provides comprehensive detection by PCR of viral and bacterial pathogens associated with respiratory illness.

  • Acute Bronchitis
  • Common Cold
  • Acute Pharyngitis
  • Acute Tonsillitis
  • Cough and Fever
  • Wheezing
  • Pneumonia
  • Viral Infection
  • Other Nasal and Sinus Diseases

ACCURACY AND QUICK RESULTS

Now your lab can provide healthcare providers with the quickest and most accurate results possible to allow them to determine an accurate diagnosis:

  • Expedited patient results
  • Multiple pathogens available
  • Unmatched accuracy of PCR
  • Simple collection
  • Direct access to experienced scientific staff
  • Personal customer service experience

For Research Use Only. Not for use In diagnostic procedures.

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Pathogens Detected in the DTPM Respiratory Molecular Testing Kit:

Pathogen Strain(s) Identified* Target Gene GenBank Accession Number Amplicon1 (base pairs) BLAST Score2 Range (High/Low) Sequences3 Reviewed Matches4 (True Positives) Specificity5
Adenovirus (RPP) Adenovirus 3, 4, 4a, 4p. 7, 10, 11, 13, 14, 16, 17, 21, 21a, 34, 35, 40, 48, 50, 51, 55, 71, B3, E4, E4, Human mastadenovirus B, D, E L3 NC_011203 59 100/90 1.02E+08 1637 100%
Bocavirus Human Bocavirus 1, Primate bocaparvovirus 1 VP2 KU557406 62 124/114 1.02E+08 643 100%
Bordetella pertussis V 3.0 Bordetella pertussis ptxS1 CP046994 79 155/150 1.02E+08 991 100%
Bordetella pertussis/holmesii Bordetella pertussis, holmesii (Bordetella bronchiseptica) Integrase CP046994 54 108/103 1.02E+08 1059 100%
Chlamydia pneumoniae [previously Chlamydophila pneumoniae] Chlamydia pneumoniae [previously known as Chlamydophila pneumoniae] porin NC_005043 66 132/112 1.02E+08 33 100%
Coronavirus 229E Human coronavirus 229, Bat coronavirus N NC_002645 74 148/132 1.02E+08 241 100%
Coronavirus HKU-1 Human coronavirus HKU-1 N NC_006577 78 147/142 1.02E+08 143 100%
Coronavirus NL63 Human coronavirus NL-63 N NC_005831 67 134/129 1.02E+08 226 100%
Coronavirus OC43 Human coronavirus OC43, Bovine, Dromedary camel , Canine, Yak, Deer (Water, White-tailed ), Waterbuck, Giraffe, Sable antelope, Porcine, Rabbit N NC_006213 65 130/108 1.02E+08 955 100%
Entertovirus / Rhinovirus (EV/RV)* Rhino A, B, C: Enterovirus D68, A23, A47, A71, Coxsackievirus A1, A6, A11, A13, A16, A20, A22, Echovirus, Human poliovirus 1, 2, 3, *Pathogens associated with hand, foot, and mouth disease (Coxsackievirus A16, A6, Enterovirus 71) are detected by this assay Polyprotein NC_038308 & NC_038311 114 171/98 1.02E+08 7798 100%
Haemophilus influenzae Haemophilus aegyptius Protein D (hpd) CP029621 67 125/120 1.02E+08 142 100%
Influenza A H3N2, H1N1, H5N1, H3N2, H1(2009), H7N9 [inquire about other strains] M1/M2 NC_007367 98 161/129 1.02E+08 54079 100%
Influenza B B/Victoria, B/Yamagata NEP NC_002211 66 126/116 1.02E+08 7064 100%
Klebsiella pneumoniae Klebsiella variicola, Klebsiella quasipneumoniae, Klebsiella africana gyrA NC_016845 57 114/105 1.02E+08 3138 100%
Klebsiella pneumoniae Klebsiella pneumoniae, K variicola, K quasipneumoniae, K africana gyrA NC_016845 57 114/107 1.02E+08 3189 100%
Legionella pneumophila Legionella worsleiensis & Legionella fairfieldensis mip NZ_CP015941 79 155/143 1.02E+08 366 100%
Metapneumovirus A & B A2, B2 F NC_039199 79 143/100 1.02E+08 1624 100%
Moraxella catarrhalis Moraxella catarrhalis UspA1 CP018059 65 130 1.02E+08 31 100%
Mycoplasma pneumoniae Mycoplasma pneumoniae P1 CP039772 61 122/111 1.02E+08 129 100%
Parainfluenza virus Type 1 HPV 1, Human respirovirus 1 L RNA polymerase NC_003461 74 142/132 1.02E+08 114 100%
Parainfluenza virus Type 2 Human Rubelavirus 2, Human orthorubelavirus 2 NP NC_003443 68 124 1.02E+08 83 100%
Parainfluenza virus Type 3 HPV 3, Human respirovirus 3 N NC_001796 75 141/131 1.02E+08 580 100%
Parainfluenza virus Type 4 HPV 4, Human parainfluenza virus 4a & 4b, Human orthorubulavirus 4 HN NC_021928 118 188/141 1.02E+08 157 100%
Parechovirus A, 1,3,4,5,6,8,17,19 5′ UTR Polyprotein NC_001897 146 146/114 1.02E+08 460 100%
Respiratory Syncytial Virus A & B A,B, Human orthopneumovirus L NC_001781 125 214/199 1.02E+08 5343 100%
Staphylococcus aureus Staphylococcus aureus acetyl-CoA acetyltransferase NC_007795 59 112/107 1.02E+08 1912 100%
Staphylococcus aureus Staphylococcus aureus acetyl-CoA-acetyltransferase NC_007795 59 112/104 1.02E+08 1969 100%
Streptococcus dysgalactiae Streptococcus dysgalactiae gyrA AP012976.1 56 112/103 1.02E+08 62 100%
Streptococcus pneumoniae Streptococcus pneumoniae lytA CP003357 60 120/110 1.02E+08 375 100%
Footnotes:

  1. The Amplicon is the amplified piece of DNA which contains the Fwd, Rev and Probe sequence. Sequence between the Fwd, Rev and Probe are also included in Amplicon.
  2. The BLAST Score describes how similar the Amplicon sequence is to aligned sequences in the non-redundant GenBank Database. The range shown as High/Low reflects the highest and lowest scores for a pathogen that would generate a positive response using this assay.
  3. The number of sequences reviewed reflect the total number sequences in the non-redundant GenBank database on the date of the analysis. This number will change as new sequences are added to the GenBank database.
  4. Matches reflect the total number of pathogens identified in the BLAST search that would generate a positive ressponse. Statistically these are the number of True Positives (the diagnostic test would indicates the presence of the correct disease) = TP
  5. False positive (FP) – Test incorrectly detects the presence of pathogen in a sample that does not contain the pathogen. Shown as an incorrect pathogen in the BLAST analysis with a Score within the High/Low range listed for the assay.
    True negative (TN) – Test correctly identifies absence of pathogen. Calculated from BLAST data as the (total number of sequences reviewed) – (total number of pathogens correctly detected or TP).

Specificity = TN / TN + FP
https://lexjansen.com/nesug/nesug10/hl/hl07.pdf

* If you have inquiries about specific strains, please contact DTPM support.

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